Veröffentlichungen "Höcker, Birte"

Koch, Johanna-Sophie ; Romero-Romero, Sergio ; Höcker, Birte:
Stepwise introduction of stabilizing mutations reveals nonlinear additive effects in de novo TIM barrels.
In: Protein Science. Bd. 33 (März 2024) Heft 3 . - e4926.
ISSN 1469-896X
DOI der Verlagsversion: https://doi.org/10.1002/pro.4926

Toledo‐Patiño, Saacnicteh ; Goetz, Sara Kathrin ; Shanmugaratnam, Sooruban ; Höcker, Birte ; Farías‐Rico, José Arcadio:
Molecular handcraft of a well‐folded protein chimera.
In: FEBS Letters. Bd. 598 (2024) Heft 11 . - S. 1375-1386.
ISSN 1873-3468
DOI der Verlagsversion: https://doi.org/10.1002/1873-3468.14856

Beck, Julian ; Shanmugaratnam, Sooruban ; Höcker, Birte:
Diversifying de novo TIM barrels by hallucination.
In: Protein Science. Bd. 33 (2024) Heft 6 . - e5001.
ISSN 1469-896X
DOI der Verlagsversion: https://doi.org/10.1002/pro.5001

Noske, Jakob ; Kynast, Josef ; Lemm, Dominik ; Schmidt, Steffen ; Höcker, Birte:
PocketOptimizer 2.0 : A modular framework for computer‐aided ligand‐binding design.
In: Protein Science. Bd. 32 (2023) Heft 1 . - No. e4516.
ISSN 1469-896X
DOI der Verlagsversion: https://doi.org/10.1002/pro.4516

Michel, Florian ; Romero-Romero, Sergio ; Höcker, Birte:
Retracing the evolution of a modern periplasmic binding protein.
In: Protein Science. Bd. 32 (2023) Heft 11 . - e4793.
ISSN 1469-896X
DOI der Verlagsversion: https://doi.org/10.1002/pro.4793

Weigert, Sebastian ; Perez‐Garcia, Pablo ; Gisdon, Florian J. ; Gagsteiger, Andreas ; Schweinshaut, Kristine ; Ullmann, G. Matthias ; Chow, Jennifer ; Streit, Wolfgang R. ; Höcker, Birte:
Investigation of the halophilic PET hydrolase PET6 from Vibrio gazogenes.
In: Protein Science. Bd. 31 (1 Dezember 2022) Heft 12 . - e4500.
ISSN 1469-896X
DOI der Verlagsversion: https://doi.org/10.1002/pro.4500

Ferruz, Noelia ; Schmidt, Steffen ; Höcker, Birte:
ProtGPT2 is a deep unsupervised language model for protein design.
In: Nature Communications. Bd. 13 (2022) Heft 1 . - No. 4348.
ISSN 2041-1723
DOI der Verlagsversion: https://doi.org/10.1038/s41467-022-32007-7

Kordes, Sina ; Romero-Romero, Sergio ; Lutz, Leonie ; Höcker, Birte:
A newly introduced salt bridge cluster improves structural and biophysical properties of de novo TIM barrels.
In: Protein Science. Bd. 31 (2022) Heft 2 . - S. 513-527.
ISSN 1469-896X
DOI der Verlagsversion: https://doi.org/10.1002/pro.4249

Wiese, Jonas Gregor ; Shanmugaratnam, Sooruban ; Höcker, Birte:
Extension of a de novo TIM barrel with a rationally designed secondary structure element.
In: Protein Science. Bd. 30 (Mai 2021) Heft 5 . - S. 982-989.
ISSN 1469-896X
DOI der Verlagsversion: https://doi.org/10.1002/pro.4064

Lechner, Horst ; Emann, Vincent R. ; Breuning, Matthias ; Höcker, Birte:
An Artificial Cofactor Catalyzing the Baylis-Hillman Reaction with Designed Streptavidin as Protein Host.
In: ChemBioChem. Bd. 22 (2021) Heft 9 . - S. 1573-1577.
ISSN 1439-7633
DOI der Verlagsversion: https://doi.org/10.1002/cbic.202000880

Ferruz, Noelia ; Michel, Florian ; Lobos, Francisco ; Schmidt, Steffen ; Höcker, Birte:
Fuzzle 2.0 : Ligand Binding in Natural Protein Building Blocks.
In: Frontiers in Molecular Biosciences. Bd. 8 (2021) . - No. 715972.
ISSN 2296-889X
DOI der Verlagsversion: https://doi.org/10.3389/fmolb.2021.715972

Kröger, Pascal ; Shanmugaratnam, Sooruban ; Scheib, Ulrike ; Höcker, Birte:
Fine-tuning spermidine binding modes in the putrescine binding protein PotF.
In: Journal of Biological Chemistry. Bd. 297 (2021) Heft 6 . - No. 101419.
ISSN 0021-9258
DOI der Verlagsversion: https://doi.org/10.1016/j.jbc.2021.101419

Ferruz, Noelia ; Schmidt, Steffen ; Höcker, Birte:
ProteinTools : a toolkit to analyze protein structures.
In: Nucleic Acids Research. Bd. 49 (2021) Heft W1 . - W559-W566.
ISSN 1362-4962
DOI der Verlagsversion: https://doi.org/10.1093/nar/gkab375

Menzel, Teresa ; Weigert, Sebastian ; Gagsteiger, Andreas ; Eich, Yannik ; Sittl, Sebastian ; Papastavrou, Georg ; Ruckdäschel, Holger ; Altstädt, Volker ; Höcker, Birte:
Impact of Enzymatic Degradation on the Material Properties of Poly(Ethylene Terephthalate).
In: Polymers. Bd. 13 (2021) Heft 22 . - No. 3885.
ISSN 2073-4360
DOI der Verlagsversion: https://doi.org/10.3390/polym13223885

Lichtenstein, Bruce R. ; Höcker, Birte:
Engineering an AB₅ Protein Carrier.
In: Scientific Reports. Bd. 2018 (23 August 2018) Heft 8 . - No. 12643.
ISSN 2045-2322
DOI der Verlagsversion: https://doi.org/10.1038/s41598-018-30910-y