Institutions of the University of Bayreuth
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Koch, Johanna-Sophie ; Romero-Romero, Sergio ; Höcker, Birte:
Stepwise introduction of stabilizing mutations reveals nonlinear additive effects in de novo TIM barrels.
In: Protein Science.
Vol. 33
(March 2024)
Issue 3
.
- e4926.
ISSN 1469-896X
DOI der Verlagsversion: https://doi.org/10.1002/pro.4926
Beck, Julian ; Shanmugaratnam, Sooruban ; Höcker, Birte:
Diversifying de novo TIM barrels by hallucination.
In: Protein Science.
Vol. 33
(2024)
Issue 6
.
- e5001.
ISSN 1469-896X
DOI der Verlagsversion: https://doi.org/10.1002/pro.5001
Toledo‐Patiño, Saacnicteh ; Goetz, Sara Kathrin ; Shanmugaratnam, Sooruban ; Höcker, Birte ; Farías‐Rico, José Arcadio:
Molecular handcraft of a well‐folded protein chimera.
In: FEBS Letters.
Vol. 598
(2024)
Issue 11
.
- pp. 1375-1386.
ISSN 1873-3468
DOI der Verlagsversion: https://doi.org/10.1002/1873-3468.14856
Kynast, Josef:
Towards Modular Protein Detection : Computational Methods to Support the Design of Peptide-Binding Pockets.
Bayreuth
,
2024
. - X, 83 P.
(
Doctoral thesis,
2024
, University of Bayreuth, Faculty of Biology, Chemistry and Earth Sciences)
Noske, Jakob ; Kynast, Josef ; Lemm, Dominik ; Schmidt, Steffen ; Höcker, Birte:
PocketOptimizer 2.0 : A modular framework for computer‐aided ligand‐binding design.
In: Protein Science.
Vol. 32
(2023)
Issue 1
.
- No. e4516.
ISSN 1469-896X
DOI der Verlagsversion: https://doi.org/10.1002/pro.4516
Michel, Florian ; Romero-Romero, Sergio ; Höcker, Birte:
Retracing the evolution of a modern periplasmic binding protein.
In: Protein Science.
Vol. 32
(2023)
Issue 11
.
- e4793.
ISSN 1469-896X
DOI der Verlagsversion: https://doi.org/10.1002/pro.4793
Kordes, Sina:
TIM Barrels 2.0 – Stabilizing and Diversifying a De Novo Designed Protein.
Bayreuth
,
2023
. - ii, 190 P.
(
Doctoral thesis,
2022
, University of Bayreuth, Faculty of Biology, Chemistry and Earth Sciences)
Weigert, Sebastian ; Perez‐Garcia, Pablo ; Gisdon, Florian J. ; Gagsteiger, Andreas ; Schweinshaut, Kristine ; Ullmann, G. Matthias ; Chow, Jennifer ; Streit, Wolfgang R. ; Höcker, Birte:
Investigation of the halophilic PET hydrolase PET6 from Vibrio gazogenes.
In: Protein Science.
Vol. 31
(1 December 2022)
Issue 12
.
- e4500.
ISSN 1469-896X
DOI der Verlagsversion: https://doi.org/10.1002/pro.4500
Weigert, Sebastian:
Investigation of PET-degrading enzymes and their implications
on microplastics.
Bayreuth
,
2022
. - IV, 112 P.
(
Doctoral thesis,
2022
, University of Bayreuth, Faculty of Biology, Chemistry and Earth Sciences)
Kordes, Sina ; Romero-Romero, Sergio ; Lutz, Leonie ; Höcker, Birte:
A newly introduced salt bridge cluster improves structural and biophysical properties of de novo TIM barrels.
In: Protein Science.
Vol. 31
(2022)
Issue 2
.
- pp. 513-527.
ISSN 1469-896X
DOI der Verlagsversion: https://doi.org/10.1002/pro.4249
Ferruz, Noelia ; Schmidt, Steffen ; Höcker, Birte:
ProtGPT2 is a deep unsupervised language model for protein design.
In: Nature Communications.
Vol. 13
(2022)
Issue 1
.
- No. 4348.
ISSN 2041-1723
DOI der Verlagsversion: https://doi.org/10.1038/s41467-022-32007-7
Wiese, Jonas Gregor ; Shanmugaratnam, Sooruban ; Höcker, Birte:
Extension of a de novo TIM barrel with a rationally designed secondary structure element.
In: Protein Science.
Vol. 30
(May 2021)
Issue 5
.
- pp. 982-989.
ISSN 1469-896X
DOI der Verlagsversion: https://doi.org/10.1002/pro.4064
Lechner, Horst ; Emann, Vincent R. ; Breuning, Matthias ; Höcker, Birte:
An Artificial Cofactor Catalyzing the Baylis-Hillman Reaction with Designed Streptavidin as Protein Host.
In: ChemBioChem.
Vol. 22
(2021)
Issue 9
.
- pp. 1573-1577.
ISSN 1439-7633
DOI der Verlagsversion: https://doi.org/10.1002/cbic.202000880
Kröger, Pascal ; Shanmugaratnam, Sooruban ; Scheib, Ulrike ; Höcker, Birte:
Fine-tuning spermidine binding modes in the putrescine binding protein PotF.
In: Journal of Biological Chemistry.
Vol. 297
(2021)
Issue 6
.
- No. 101419.
ISSN 0021-9258
DOI der Verlagsversion: https://doi.org/10.1016/j.jbc.2021.101419
Ferruz, Noelia ; Michel, Florian ; Lobos, Francisco ; Schmidt, Steffen ; Höcker, Birte:
Fuzzle 2.0 : Ligand Binding in Natural Protein Building Blocks.
In: Frontiers in Molecular Biosciences.
Vol. 8
(2021)
.
- No. 715972.
ISSN 2296-889X
DOI der Verlagsversion: https://doi.org/10.3389/fmolb.2021.715972
Menzel, Teresa ; Weigert, Sebastian ; Gagsteiger, Andreas ; Eich, Yannik ; Sittl, Sebastian ; Papastavrou, Georg ; Ruckdäschel, Holger ; Altstädt, Volker ; Höcker, Birte:
Impact of Enzymatic Degradation on the Material Properties of Poly(Ethylene Terephthalate).
In: Polymers.
Vol. 13
(2021)
Issue 22
.
- No. 3885.
ISSN 2073-4360
DOI der Verlagsversion: https://doi.org/10.3390/polym13223885
Ferruz, Noelia ; Schmidt, Steffen ; Höcker, Birte:
ProteinTools : a toolkit to analyze protein structures.
In: Nucleic Acids Research.
Vol. 49
(2021)
Issue W1
.
- W559-W566.
ISSN 1362-4962
DOI der Verlagsversion: https://doi.org/10.1093/nar/gkab375
You, Weijie:
Activation and inhibition of Sirt6 by small molecules.
Bayreuth
,
2019
. - 120 P.
(
Doctoral thesis,
2019
, University of Bayreuth, Faculty of Biology, Chemistry and Earth Sciences)
Lichtenstein, Bruce R. ; Höcker, Birte:
Engineering an AB₅ Protein Carrier.
In: Scientific Reports.
Vol. 2018
(23 August 2018)
Issue 8
.
- No. 12643.
ISSN 2045-2322
DOI der Verlagsversion: https://doi.org/10.1038/s41598-018-30910-y