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Designing building blocks of covalent organic frameworks through on-the-fly batch-based Bayesian optimization

DOI zum Zitieren der Version auf EPub Bayreuth: https://doi.org/10.15495/EPub_UBT_00008179
URN to cite this document: urn:nbn:de:bvb:703-epub-8179-0

Title data

Yao, Yuxuan ; Oberhofer, Harald:
Designing building blocks of covalent organic frameworks through on-the-fly batch-based Bayesian optimization.
In: The Journal of Chemical Physics. Vol. 161 (2024) Issue 7 . - 074102.
ISSN 0021-9606
DOI der Verlagsversion: https://doi.org/10.1063/5.0223540

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Project information

Project title:
Project's official title
Project's id
Excellence Cluster "Econversion"
EXC 852 2089/1-390776260
No information
OB 425/9-1

Project financing: Deutsche Forschungsgemeinschaft

Abstract

In this work, we use a Bayesian optimization (BO) algorithm to sample the space of covalent organic framework (COF) components aimed at the design of COFs with a high hole conductivity. COFs are crystalline, often porous coordination polymers, where organic molecular units—called building blocks (BBs)—are connected by covalent bonds. Even though we limit ourselves here to a space of three-fold symmetric BBs forming two-dimensional COF sheets, their design space is still much too large to be sampled by traditional means through evaluating the properties of each element in this space from first principles. In order to ensure valid BBs, we use a molecular generation algorithm that, by construction, leads to rigid three-fold symmetric molecules. The BO approach then trains two distinct surrogate models for two conductivity properties, level alignment vs a reference electrode and reorganization free energy, which are combined in a fitness function as the objective that evaluates BBs’ conductivities. These continuously improving surrogates allow the prediction of a material’s properties at a low computational cost. It thus allows us to select promising candidates which, together with candidates that are very different from the molecules already sampled, form the updated training sets of the surrogate models. In the course of 20 such training steps, we find a number of promising candidates, some being only variations on already known motifs and others being completely novel. Finally, we subject the six best such candidates to a computational reverse synthesis analysis to gauge their real-world synthesizability.

Further data

Item Type: Article in a journal
Keywords: Bayesian Optimisation; Covalent Organic Frameworks; Machine Learning
DDC Subjects: 500 Science > 530 Physics
500 Science > 540 Chemistry
Institutions of the University: Faculties > Faculty of Mathematics, Physics und Computer Science > Department of Physics > Chair Theoretical Physics VII - Computational Materials Design (BayBatt)
Faculties > Faculty of Mathematics, Physics und Computer Science > Department of Physics > Chair Theoretical Physics VII - Computational Materials Design (BayBatt) > Chair Theoretical Physics VII - Computational Materials Design (BayBatt) - Univ.-Prof. Dr. Harald Oberhofer
Research Institutions > Central research institutes > Bayerisches Zentrum für Batterietechnik - BayBatt
Faculties
Faculties > Faculty of Mathematics, Physics und Computer Science
Faculties > Faculty of Mathematics, Physics und Computer Science > Department of Physics
Research Institutions
Research Institutions > Central research institutes
Language: English
Originates at UBT: Yes
URN: urn:nbn:de:bvb:703-epub-8179-0
Date Deposited: 10 Feb 2025 08:42
Last Modified: 10 Feb 2025 08:42
URI: https://epub.uni-bayreuth.de/id/eprint/8179

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